Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATTTCAACCACCCAGCTGCAAT
(((((((((.(((((....((&))....)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024577
GeneSymbolSH3TC2
Binding site16985,17009
Score0.923
Seed1
Au0.485
Energy-21.5
Binding len24
Me-5.413
Phylopstem-0.04345292222222222
Phylopflank-0.25855123625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure