Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGATTCTGGAGACTGCAGG
((((((((.(((.....((((&)))).....))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024583
GeneSymbolSCRN3
Binding site586,609
Score0.923
Seed1
Au0.515
Energy-18.9
Binding len23
Me-8.108
Phylopstem5.285229111111111
Phylopflank5.243827092999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure