Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTAACGGCTACTCAAAGCCACTTAGAAAACAGGAAGCAGCAGCTGCAGC
((((((((((.(((.......&.))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024584
GeneSymbolCCDC121
Binding site825,875
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len16
Me-7.731
Phylopstem0.12845387
Phylopflank0.10913880874999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure