Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGGAACAACCAGCTGCTGCAC
.((((((.((((((((..(((&))).....)))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024589
GeneSymbolROGDI
Binding site334,359
Score0.846
Seed1
Au0.412
Energy-22.2
Binding len25
Me-6.107
Phylopstem-0.6888403777777776
Phylopflank-0.7210833950000002
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure