Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCGGCCTGCTCCCGGGCTGCGC
.(((((((.(((..((.((((&.))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024592
GeneSymbolSRD5A3
Binding site199,226
Score0.846
Seed1
Au0.294
Energy-21.2
Binding len20
Me-6.996
Phylopstem0.6582178571428571
Phylopflank1.40674215875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure