Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACATTGTATGTCT
....(((((((((((((((...&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024594
GeneSymbolPANK3
Binding site9392,9408
Score0.923
Seed0
Au0.676
Energy-19.5
Binding len16
Me-9.547
Phylopstem4.028632626666668
Phylopflank5.02607611375
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure