Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAAAGTATCAGCCAGGTG
(((((((((((..(((((....&)))))..))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024596
GeneSymbolMCPH1
Binding site5630,5651
Score0.846
Seed1
Au0.588
Energy-18.3
Binding len21
Me-8.574
Phylopstem0.18331395846153845
Phylopflank0.048867555
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure