Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCACCAGCCGCTTCTGCGAG
((((((..(((((((.((((.&))))...)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024599
GeneSymbolRHBDF2
Binding site2812,2835
Score0.846
Seed0
Au0.397
Energy-24.4
Binding len23
Me-8.028
Phylopstem2.5202918571428574
Phylopflank3.0589474325
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure