Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGGGGCCGCAGGGAGCTGTGAG
((((((((((((((.((((..&)))).)))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024599
GeneSymbolRHBDF2
Binding site58,82
Score0.846
Seed1
Au0.309
Energy-23.4
Binding len24
Me-4.673
Phylopstem0.6521403000000002
Phylopflank0.14173599500000003
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
Position5UTR
2D Structure