Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCGACTGCGGGCTGCAGG
((((((((((((((((.((((&))))..)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024602
GeneSymbolHECTD3
Binding site452,476
Score0.846
Seed1
Au0.265
Energy-28.4
Binding len24
Me-3.938
Phylopstem0.4076062823529411
Phylopflank-0.08603240749999998
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure