Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGATAGCACTACTGCTGCTGCT
..(((((.((((((((..(((&)))..))).....))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024604
GeneSymbolRPAP3
Binding site1431,1456
Score0.923
Seed0
Au0.588
Energy-18.5
Binding len25
Me-7.271
Phylopstem0.0872763076923077
Phylopflank0.24998576375000003
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure