Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTACTTCCAGCTGCAGT
(((((((((.(((.((.....&)).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024604
GeneSymbolRPAP3
Binding site3869,3887
Score1.0
Seed1
Au0.632
Energy-17.5
Binding len18
Me-6.037
Phylopstem3.176733
Phylopflank3.2428482249999995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure