Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCACGAAAAGTAGCTGCT
..((((((((..((((..(((&.)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024612
GeneSymbolDHX40
Binding site374,395
Score0.865
Seed1
Au0.574
Energy-18.4
Binding len20
Me-11.129
Phylopstem4.3494114375
Phylopflank4.5820929
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure