Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTGCTGCTGCAAG
(((((((.((((.((..((((&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024619
GeneSymbolFN3KRP
Binding site1236,1255
Score0.846
Seed1
Au0.426
Energy-21.3
Binding len19
Me-7.773
Phylopstem-1.7500348571428572
Phylopflank-0.7075336237500002
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure