Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGGAGCCCAGCTGG
...((((((.((((.((((.(&).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024619
GeneSymbolFN3KRP
Binding site354,372
Score1.0
Seed0
Au0.515
Energy-20.6
Binding len18
Me-8.492
Phylopstem3.8127876
Phylopflank3.0645636849999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure