Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTTGCAGCTTTGTGAAACTCTGAGCAGA
((((((((((((..(((((((&)))))))))))))))..............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024621
GeneSymbolVEPH1
Binding site4201,4235
Score0.923
Seed1
Au0.485
Energy-20.0
Binding len34
Me-6.084
Phylopstem2.3921976153846156
Phylopflank1.2657521107499998
Longest consecutive pairings15
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure