Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGGCCGGCTGTAAA
(((((((..(((((((((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024625
GeneSymbolZC3HAV1
Binding site146,165
Score1.0
Seed1
Au0.397
Energy-25.9
Binding len19
Me-7.308
Phylopstem-0.3358579
Phylopflank-0.3982699625
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure