Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGTGTTAAGAGTGATAAG
..((((((((((((((((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_024626
GeneSymbolVTCN1
Binding site1171,1190
Score0.846
Seed1
Au0.603
Energy-17.9
Binding len19
Me-4.957
Phylopstem0.19807878333333337
Phylopflank0.14571648874999998
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure