Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGCTGCTGTTGCT
..(((((.(((((((..((((&)))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024628
GeneSymbolSLC12A8
Binding site635,654
Score0.846
Seed0
Au0.441
Energy-21.8
Binding len19
Me-7.504
Phylopstem-0.13699057142857143
Phylopflank-0.28958903
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure