Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCTGGGACAAGGGAAGGGGCCAAACAAAACACCCGTGGCTGCC
..((((((((((((((..(((&.)))..)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024628
GeneSymbolSLC12A8
Binding site1135,1183
Score0.846
Seed1
Au0.397
Energy-22.1
Binding len26
Me-4.957
Phylopstem0.10832799999999997
Phylopflank0.10104778749999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure