Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTCAGAGAACAGATAGTAACAATTGTTTGCAGCTGCAGTGTTGCAT
.((((((((((((((((((..&.))))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024632
GeneSymbolSAP30L
Binding site4104,4154
Score0.872
Seed1
Au0.676
Energy-24.1
Binding len22
Me-3.793
Phylopstem0.14699999999999996
Phylopflank0.41742499999999993
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure