Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGAATGACCCCCCGATCTCCAACCAGTGCCTTCCGCAGCTGCAC
.(((((((((((....(((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024637
GeneSymbolGAL3ST4
Binding site133,183
Score0.923
Seed1
Au0.353
Energy-26.9
Binding len18
Me-6.908
Phylopstem0.7714594545454545
Phylopflank-0.007066767999999975
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure