Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTCTGCGGCTGCAGG
((((((((((((......(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024638
GeneSymbolQTRT2
Binding site774,792
Score1.0
Seed1
Au0.529
Energy-20.3
Binding len18
Me-7.052
Phylopstem2.4036684083333335
Phylopflank3.55576133625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure