Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGTGGCCGAGCTGCGC
.(((((((.((((((...(((&)))....))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024640
GeneSymbolYRDC
Binding site241,262
Score0.923
Seed1
Au0.176
Energy-20.5
Binding len21
Me-5.083
Phylopstem0.267751
Phylopflank0.06752058500000002
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure