Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAAGAAGTGAATTACCCGACCCTGCAAA
((((((...(((((((((((.&))))))))............)))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024641
GeneSymbolMANEA
Binding site75,108
Score0.846
Seed0
Au0.588
Energy-19.1
Binding len33
Me-8.851
Phylopstem-0.3812626260869566
Phylopflank0.46714713937499963
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end7
Position5UTR
2D Structure