Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAACTGCCTTTACCATTTTAGTTGTAAC
((((((((((((((((((...&))))))))))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024641
GeneSymbolMANEA
Binding site4180,4211
Score0.923
Seed1
Au0.735
Energy-18.8
Binding len31
Me-3.938
Phylopstem0.3657081799999999
Phylopflank0.3419527675
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure