Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGCGGCTGTCGGTTGA
...(((((((((((((.((((&))))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024643
GeneSymbolZC2HC1C
Binding site17,38
Score0.846
Seed0
Au0.358
Energy-20.7
Binding len21
Me-6.515
Phylopstem0.16707105714285717
Phylopflank-0.07146223163461539
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure