Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTTGTATGATAAGGGG
.(((..((((((((((......&))))))))))....))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024644
GeneSymbolRIOX1
Binding site1957,1975
Score0.846
Seed0
Au0.456
Energy-15.7
Binding len18
Me-9.813
Phylopstem1.493113943
Phylopflank2.365932947875
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure