Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGGCTGCGGCTGCGGCTGCGG
(((((((((((((((((....&.))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024646
GeneSymbolZYG11B
Binding site21,46
Score0.923
Seed1
Au0.294
Energy-27.6
Binding len19
Me-3.938
Phylopstem1.198658282352941
Phylopflank0.748413880075
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure