Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGGCAGCCCGGCGCAGG
((((.((((.((((((...((&))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024653
GeneSymbolPRKRIP1
Binding site1608,1628
Score0.846
Seed0
Au0.324
Energy-19.2
Binding len20
Me-9.299
Phylopstem0.24209835000000002
Phylopflank-0.45648013125000003
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure