Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTCATGCCACAAGTGTTTATTGAGCACCTGTGTGCCAGGC
.(((((((((((.(((......&.)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024656
GeneSymbolCOLGALT1
Binding site3090,3132
Score1.0
Seed1
Au0.5
Energy-21.4
Binding len18
Me-5.082
Phylopstem0.10737690909090908
Phylopflank0.15090273000000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure