Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGACTGTGTGCCGGGC
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024656
GeneSymbolCOLGALT1
Binding site2968,2985
Score1.0
Seed1
Au0.5
Energy-19.8
Binding len13
Me-6.908
Phylopstem-0.11527133636363639
Phylopflank-0.21887249124999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure