Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTAGGGGACCCAGCTGCAC
.((((((((.((((.((((((&)))))...).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024656
GeneSymbolCOLGALT1
Binding site3464,3487
Score0.923
Seed1
Au0.368
Energy-21.8
Binding len23
Me-5.771
Phylopstem0.2859310675
Phylopflank-0.08934609050000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure