Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCCCTGCCCTGGCAGCCGCGGCTGGGGG
((.(((((((((((((.(((.&.))).))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024658
GeneSymbolIPO4
Binding site2540,2572
Score1.0
Seed0
Au0.338
Energy-30.5
Binding len22
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure