Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCTAGGTTGCCAGGTT
((((((((..(...(((((...&)))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024659
GeneSymbolGTDC1
Binding site1824,1844
Score0.923
Seed1
Au0.485
Energy-21.1
Binding len20
Me-11.729
Phylopstem1.59885305
Phylopflank1.6413551445000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure