Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCCGCTGCGCTGCAGA
(((((((.(((((.((..(((&))).)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024664
GeneSymbolPPCS
Binding site4,24
Score0.923
Seed1
Au0.321
Energy-22.6
Binding len20
Me-7.108
Phylopstem-0.583095142857143
Phylopflank0.6822779683333332
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure