Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTGCGGCTGTG
..((((((((((((...((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024664
GeneSymbolPPCS
Binding site549,566
Score0.923
Seed1
Au0.515
Energy-22.6
Binding len17
Me-5.925
Phylopstem5.453055300000002
Phylopflank4.3248719612499995
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure