Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAAGCACTGCAGA
((((((.(((..(((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024666
GeneSymbolAAGAB
Binding site2334,2353
Score0.923
Seed0
Au0.515
Energy-19.7
Binding len19
Me-11.653
Phylopstem3.2860386666666668
Phylopflank4.547564425
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure