Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGAGCAGCTGTAC
.(((((((((.......((((&)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024670
GeneSymbolSUV39H2
Binding site2187,2206
Score1.0
Seed1
Au0.618
Energy-19.6
Binding len19
Me-13.079
Phylopstem-0.031293111111111105
Phylopflank0.21781839062499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure