Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCACTGTATGCATCGGA
.((..(((((((.(((((....&))))).)))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024672
GeneSymbolTHAP9
Binding site2277,2296
Score0.846
Seed0
Au0.559
Energy-17.3
Binding len19
Me-12.234
Phylopstem1.8177852285714284
Phylopflank1.3043599334999998
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure