Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&TGCAAATTTGAAAAATCATGTACTGAAAGTGAATAGTGC
(((((((((((((((((((..&.)))))))))))))).))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_024672
GeneSymbolTHAP9
Binding site1462,1501
Score0.846
Seed1
Au0.618
Energy-17.7
Binding len22
Me-3.938
Phylopstem0.7840242350000002
Phylopflank1.4986552562499995
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure