Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAAGCAAAGCAGCTGCAGC
((((((((((..((((..(((&)))...)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366299
GeneSymbolKHSRP
Binding site1791,1813
Score0.846
Seed1
Au0.265
Energy-22.5
Binding len22
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure