Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTGCAGGCTCAGCTGCT
..(((((((.(.(((((((..&))))))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024672
GeneSymbolTHAP9
Binding site1111,1129
Score0.923
Seed1
Au0.559
Energy-21.7
Binding len18
Me-9.546
Phylopstem1.3570182857142856
Phylopflank1.9651642899999997
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure