Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTTGATTGCTAGGTG
((((((((..((((((((....&))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_024674
GeneSymbolLIN28A
Binding site2333,2352
Score1.0
Seed1
Au0.588
Energy-23.2
Binding len19
Me-6.236
Phylopstem0.609281475
Phylopflank1.8669447060000004
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure