Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGCAGACCTGCT
..((((((((((((((.....&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024674
GeneSymbolLIN28A
Binding site1249,1266
Score1.0
Seed1
Au0.397
Energy-20.6
Binding len17
Me-4.957
Phylopstem0.48964981875
Phylopflank0.6345551924999999
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure