Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGCCAGGAGCTGCAT
.(((((((.(((((((.....&))).))).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024675
GeneSymbolPALB2
Binding site2631,2649
Score0.897
Seed1
Au0.544
Energy-18.5
Binding len18
Me-4.85
Phylopstem3.3189138888888885
Phylopflank2.0185391875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure