Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCGGACGAGCTGAAGCTGCAAG
((((((((.(((((((..(.(&).)..)).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024676
GeneSymbolSH3D21
Binding site127,150
Score0.846
Seed1
Au0.426
Energy-19.0
Binding len23
Me-4.994
Phylopstem0.9406326250000001
Phylopflank2.1497070424999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure