Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCAGGACACAGTTGCAGA
(((((((((..((((((((((&)))))))...))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_024685
GeneSymbolBBS10
Binding site1457,1481
Score0.846
Seed1
Au0.603
Energy-20.9
Binding len24
Me-8.005
Phylopstem2.5921233846153844
Phylopflank2.0541512452499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure