Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GGGTATCAGGAGTGGTGAC
..((((((((((((((((.(.&).)))))))))))))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_024690
GeneSymbolMUC16
Binding site33481,33500
Score0.904
Seed1
Au0.456
Energy-20.3
Binding len19
Me-4.957
Phylopstem-0.4418970187499999
Phylopflank0.01713487874999999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure