Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&AGGCTGCAGGGTCA
.(((((((((((((.......&))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_024690
GeneSymbolMUC16
Binding site42125,42139
Score0.923
Seed1
Au0.397
Energy-28.8
Binding len14
Me-4.762
Phylopstem-0.6050557692307691
Phylopflank-0.53792616
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure